IMTM, Palacký University Olomouc
High Performance Computing Facility
Accelerating discovery through computational power — secure, in-house infrastructure for bioinformatics, chemoinformatics and genome analysis.
- 2,784 CPU cores
- 9.8TiB RAM in total
- 168TFLOPs Peak FP64 performance
- 100Gbit/s Dedicated link to IT4I
Documentation
Where do you want to start?
Get Access
Request an account, generate an SSH key pair and connect to the cluster.
Read moreCluster
Compute nodes, networking, scheduler and theoretical peak performance.
Read moreStorage
Home, project and scratch storage, and how to transfer your data.
Read moreRunning Jobs
Write job scripts, run parallel and interactive jobs, job arrays and pipelines.
Read moreTroubleshooting
Solutions to common problems with connection, jobs, software and storage.
Read moreSoftware
Python, R, Conda, Jupyter, Singularity containers and compiling your own code.
Read moreAbout
Built for sensitive, cutting-edge research
The Institute of Molecular and Translational Medicine (IMTM), Faculty of Medicine and Dentistry, Palacký University in Olomouc is a leading Czech translational medicine institute established in 2010. IMTM was established within the infrastructural project initiated by the Palacký University, in close partnership with the University Hospital in Olomouc, the Institute of Chemical Technology and the Institute of Organic Chemistry and Biochemistry, AS CR, v.v.i. in Prague. Our research at IMTM is focused on better understanding of human diseases and development of future medicines and diagnostics.
IMTM operates its own high-performance computing (HPC) facility, designed to handle the demanding needs of cutting-edge research in areas like bioinformatics, chemoinformatics, and genome analysis. Since many of these projects involve sensitive patient data, the entire system is managed solely by IMTM staff—no external vendors or third parties are involved, ensuring maximum data security and privacy.
What sets this facility apart is that much of the software — especially programs that use advanced graphics processors (GPUs) for faster performance—has been developed in-house at IMTM. This means researchers have access to powerful, customized tools that aren't available anywhere else.
Contact
Get in touch
Faculty of Medicine and Dentistry
Palacký University Olomouc
Hněvotínská 1333/5, 779 00 Olomouc
Czech Republic
- +420 585 632 111
- +420 585 632 180
- recepce.umtm@upol.cz
- www.imtm.cz




